I have now verified (by running tests on SVN 2746 and 2747) that it was the changes in the SVN 2747 checkin that are causing the bugs, both (1) the pauses in IE8 and (2) FF "dying" after a while.
The first problem is the IE8 branching mentioned above that was changed because of IE8 problems reported on the mailing list. I can't reproduce that user's problems so I think either IE8 has changed since then, or that user had done some other local changes. The suggested changes definitely didn't work.
The second problem is due to the changes to Reverse Ajax retry policy, and effectively causes a timing bug that sometimes start several paralell polls, consuming the available connections.
I'll look into this at the same time as the servlet 3 stuff during the coming weeks.